After some testing im finding its happening on some synths and modular modules but not all. For instance it happens on inferno, ez synth, flexor. But doesnt happen on minimax, profit 5, modular3 stock filters.
Often i assign a modwheel or knob on my midi controller to modulate the cutoff on a synths filter. When i play with controller and modulate the filter cutoff i hear stuttering while i modulate it on the problematic devices i listed above. this only happens when using the midi controller, if i modulate the knob with my mouse there is no stuttering. Also i dont notice any latency while playing keys on the midi controller, this is just while modulating the knob. Ive tried different latency settings, including lowest no help. I have 2 cards installed tried midi input on both cards no help. Heres 2 sound examples on one of the above problematic synths, one modulating with mouse which is smooth, than with midi controller can hear the stuttering im talking about.
Any ideas?

https://soundcloud.com/metamorphosis321 ... al_sharing
windows 7
scope v5.1.2709-x64
scope home card and scope pro card (18dsp total)